Tastan Bishop Ö (Editor) “Bioinformatics and Data Analysis in Microbiology” Horizon/Caister Academic Press (April 2014) ISBN: 978-1-908230-39-3.
Jongeneel CV, Achinike-Oduaran O, Adebiyi E, Adebiyi M, Adeyemi S, Akanle B, et al. “Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network” PLoS Computational Biology 2017 June 1 doi: 10.1371/journal.pcbi.1005419. PMID: 28570565
Ilboudo H, Noyes H, Mulindwa J, Kimuda MP, Koffi M, Kaboré JW, et al. “Introducing the TrypanoGEN biobank: A valuable resource for the elimination of human African trypanosomiasis” PLoS Neglected Tropical Diseases 2017 June 1 doi: 10.1371/journal.pntd.0005438. PMID: 28570558
Brown DK, Penkler DL, Sheik Amamuddy O, Ross C, Atilgan AR, Atilgan C, Tastan Bishop Ö. “MD-TASK: a software suite for analyzing molecular dynamics trajectories.” Bioinformatics 2017 May 31 doi: 10.1093/bioinformatics/btx349. PMID: 28575169
Ross C, Knox C, & Tastan Bishop Ö. “Interacting motif networks located in hotspots associated with RNA release are conserved in Enterovirus capsids.” FEBS letters 2017 May 22. doi: 10.1002/1873-3468.12663. PMID: 28471477
Penkler D, Sensoy O, Atilgan C, & Tastan Bishop Ö. “Perturbation Response Scanning Reveals Key Residues for Allosteric Control in Hsp70.” Journal of Chemical Information and Modeling 2017 May 15. doi: 10.1021/acs.jcim.6b00775. PMID: 28505454
Moses V, Tastan Bishop Ö, & Lobb KA. “The evaluation and validation of copper (II) force field parameters of the Auxiliary Activity family 9 enzymes.” Chemical Physics Letters 2017 April 8; 678, 91-97. doi: 10.1016/j.cplett.2017.04.022.
Mulder NJ, Adebiyi E, Adebiyi M, Adeyemi S, Ahmed A, Ahmed R, et al. “Development of Bioinformatics Infrastructure for Genomics Research in H3Africa.” Global Heart 2017 Mar 13. pii: S2211-8160(17)30005-4. doi: 10.1016/j.gheart.2017.01.005. PMID: 28302555
Brown DK, Sheik Amamuddy O, Tastan Bishop Ö. “Structure-Based Analysis of Single Nucleotide Variants in the Renin-Angiotensinogen Complex.” Global Heart 2017 Mar 13. pii: S2211-8160(17)30006-6. doi: 10.1016/j.gheart.2017.01.006. PMID: 28302554
Brown DK, Tastan Bishop Ö. “Role of Structural Bioinformatics in Drug Discovery by Computational SNP Analysis: A Proposed Protocol for Analyzing Variation at the Protein Level.” Global Heart 2017 Mar 13. pii: S2211-8160(17)30009-1. doi: 10.1016/j.gheart.2017.01.009. PMID: 28302551
Cornick JE, Tastan Bishop Ö, Yalcin F, Kiran AM, Kumwenda B, Chaguza C, et al. “The global distribution and diversity of protein vaccine candidate antigens in the highly virulent Streptococcus pnuemoniae serotype 1.” Vaccine 2017 Feb 7;35(6):972-980. doi: 10.1016/j.vaccine.2016.12.037. PMID: 28081968
Hatherley R, Brown DK, Glenister M, Tastan Bishop Ö. “PRIMO: An Interactive Homology Modeling Pipeline” PLoS One 2016, Nov 17;11(11):e0166698. doi: 10.1371/journal.pone.0166698. PMID: 27855192
Moses V, Hatherley R, Tastan Bishop Ö. “Bioinformatic characterization of type-specific sequence and structural features in auxiliary activity family 9 proteins.” Biotechnol Biofuels 2016, Nov 9;9:239. doi: 10.1186/s13068-016-0655-2. PMID: 27833654
Ross C, Upfold N, Luke GA, Bishop ÖT, Knox C “Subcellular localisation of Theiler's Murine Encephalomyelitis Virus (TMEV) capsid subunit VP1 vis-á-vis host protein Hsp90” Virus Research 2016, Aug 15;222:53-63. doi: 10.1016/j.virusres.2016.06.003.
Thommas M. Musyoka, Aquillah M. Kanzi, Kevin Lobb and Özlem Tastan Bishop “Combined Structure- and Ligand-Based Docking and Molecular Dynamics Studies of Falcipains against a South African Natural Compound and its Analogs” Nature Scientific Reports 2016, Mar 31;6:23690. doi: 10.1038/srep23690.
Mulder NJ, Christoffels A, de Oliveira T, Gamieldien J, Hazelhurst S, Joubert F, Kumuthini J, Pillay CS, Snoep JL, Tastan Bishop Ö, Tiffin N. “The Development of Computational Biology in South Africa: Successes Achieved and Lessons Learnt” PLoS Computational Biology 2016, Feb 4;12(2):e1004395. doi: 10.1371/journal.pcbi.1004395.
Thommas M. Musyoka, Aquillah M. Kanzi, Kevin Lobb and Özlem Tastan Bishop “Analysis of Non-Peptidic Compounds as Potential Malarial Inhibitors against Plasmodial Cysteine Proteases via Integrated Virtual Screening Workflow” Journal of Biomolecular Structure and Dynamics 2016, Jan 28:1-18 1. [Epub ahead of print], doi: 10.1080/07391102.2015.1108231.
Kibet CK and Machanick P. “Transcription factor motif quality assessment requires systematic comparative analysis” F1000Research 2016, 4(ISCB Comm J):1429 (doi: 10.12688/f1000research.7408.2)
Mulder NJ, Adebiyi E, Alami R, Benkahla A, Brandful J, Doumbia S, Everett D, Fadlelmola FM, Gaboun F, Gaseitsiwe S, Ghazal H, Hazelhurst S, Ibrahimi A, Hide W, Jaufeerally Fakim Y, Jongeneel V, Joubert F, Kassim S, Kayondo J, Kumuthini J, Lyantagaye S, Makani J, Alzohairy AM, Masiga D, Moussa A, Nash O, Ouwe Missi Oukem-Boyer O, Owusu-Dabo E, Panji S, Patterton H, Radouani F, Sadki K, Seghrouchni F, Tastan Bishop Ö, Tiffin N, Ulenga N, H3ABioNet Consortium. “H3ABioNet, a sustainable Pan-African Bioinformatics Network for Human Heredity and Health in Africa.” Genome Research 2015, Dec 1. pii: gr.196295.115.
Ngonidzashe Faya, David Penkler and Özlem Tastan Bishop “Human, Vector and Parasite Hsp90 Proteins: A Comparative Bioinformatics Analysis” FEBS Open Bio 2015, 10.1016/j.fob.2015.11.003.
David K Brown, David L Penkler, Thommas M Musyoka, and Özlem Tastan Bishop "JMS: An open source workflow management system and web-based cluster front-end for high performance computing" PLoS ONE 10(8): e0134273, 2015. doi: 10.1371/journal.pone.0134273
Rowan Hatherley, David K Brown, Thommas M Musyoka, David L Penkler, Ngonidzashe Faya, Kevin A Lobb and Özlem Tastan Bishop "SANCDB: A South African Natural Compound Database" Journal of Cheminformatics 7 (29), 2015. doi: 10.1186/s13321-015-0080-8.
Rowan Hatherley, Crystal-Leigh Clitheroe, Ngonidzashe Faya and Özlem Tastan Bishop "Plasmodium falciparum Hop: Detailed analysis on complex formation with Hsp70 and Hsp90" Biochemical and Biophysical Research Communications 456: 440-445, 2015. doi: 10.1016/j.bbrc.2014.11.103. Epub 2014 Dec 4. pii: S0006-291X(14)02144-5
H3Africa Consortium “Enabling Genomic Revolution in Africa” Science, 2014, vol 344 (6190) pp 1346-1348.
P Machanick and Ö Tastan Bishop, "How to establish a bioinformatics postgraduate degree programme - a case study from South Africa" Briefings in Bioinformatics 16 (2): 346 - 54, 2015. doi: 10.1093/bib/bbu014. Epub 2014 May 2.
Hatherley, R., Blatch, G.L., Tastan Bishop, Ö.
“Plasmodium falciparum Hsp70-x: An atypical cytosolic heat shock protein”
Journal of Biomolecular Structure and Dynamics 32(11): 1766 - 79, 2014 doi: 10.1080/07391102.2013.834849. Epub 2013 Sep 13; Arxiv number: 1307.3446
Tastan Bishop, Ö., Edkins, A., Blatch, G.L., “Sequence and domain conservation of the coelacanth Hsp40 and Hsp90 chaperones suggests conservation of function” Journal of Experimental Zoology Part B: Molecular and Developmental Evolution 322 (6): 359 - 78, 2014. doi: 10.1002/jez.b.22541. Epub 2013 Sep 17.
Kumwenda, B., Litthauer, D., Tastan Bishop, Ö. and Reva, O. “Analysis of Protein Thermostability in Industrially Important Thermus Bacteria Species” Evolutionary Bioinformatics 9: 327–342, 2013.
Tastan Bishop, Ö. and Kroon, M. “Study of protein complexes via homology modeling, applied to cysteine proteases and their protein inhibitors” Journal of Molecular Modeling 17 (12): 3163 - 72, 2011.
Yssel, A., Reva O., Tastan Bishop, Ö. “Comparative Structural Bioinformatics Analysis of Bacillus amyloliquefaciens Chemotaxis Proteins within Bacillus subtilis Group” Applied Microbiology and Biotechnology 92 (5): 997 - 1008, 2011.
Mautsa, N., Prinsloo, E., Tastan Bishop, Ö. and Blatch, G.L. “Characterization of the PINIT domain of PIAS3: In vitro interaction with STAT3” Journal of Molecular Recognition 24: 795 - 803, 2011.
Vorster BJ, Tastan Bishop Ö, Schlüter U, Coetzer N and Michaud D “New insights towards phytocystatin – papain interactions” Annals of Applied Biology 96: 403 – 408, 2010.